Conceptualization of anatomical spatial entities in the Digital Anatomist Foundational Model
نویسندگان
چکیده
Anatomical spatial concepts are indispensable in educational and clinical discourse, yet a system for representing these concepts has not been proposed. Guided by explicit principles and definitions of the Digital Anatomist Foundational Model, we developed an ontology of spaces, surfaces, lines and points that are associated with anatomical structures. Ontologies for Anatomical Structure and Anatomical Spatial Entity were instantiated for the thorax, abdomen, pelvis and perineum. Representing the concepts in--part of--hierarchies as well, provided formative evaluation of the classification. We invite empirical evaluation of the Foundational Model through its use for educational and clinical applications.
منابع مشابه
The digital anatomist structural abstraction: a scheme for the spatial description of anatomical entities
In this paper, we propose a generalized scheme for the symbolic description of the spatial attributes of anatomical entities. The power of the scheme lies in the ability to model the spatial objects at the highest level of granularity: information can be obtained at the desired level of detail needed for a given application. This scheme uses the topological classes of point, line, surface, and ...
متن کاملThe potential of the digital anatomist foundational model for assuring consistency in UMLS sources
Inconsistent anatomical concept representation can be identified in anatomy textbooks and hard copy term lists, as well as in UMLS source vocabularies and other controlled medical terminologies. In this report we select some examples of inconsistent representations of anatomical concepts, and illustrate how these inconsistencies can be explained and reconciled by the Digital Anatomist Foundatio...
متن کاملSymbolic modeling of structural relationships in the Foundational Model of Anatomy
The need for a sharable resource that can provide deep anatomical knowledge and support inference for biomedical applications has recently been the driving force in the creation of biomedical ontologies. Previous attempts at the symbolic representation of anatomical relationships necessary for such ontologies have been largely limited to general partonomy and class subsumption. We propose an on...
متن کاملResearch Paper: Motivation and Organizational Principles for Anatomical Knowledge Representation: The Digital Anatomist Symbolic Knowledge Base
OBJECTIVE Conceptualization of the physical objects and spaces that constitute the human body at the macroscopic level of organization, specified as a machine-parseable ontology that, in its human-readable form, is comprehensible to both expert and novice users of anatomical information. DESIGN Conceived as an anatomical enhancement of the UMLS Semantic Network and Metathesaurus, the anatomic...
متن کاملThe digital anatomist foundational model: principles for defining and structuring its concept domain
We define a foundational model as an abstraction of a body of knowledge that explicitly declares the principles and concepts necessary for coherently and consistently modelling a knowledge domain. Principles for a foundational model of anatomy are defined and used to specify the components of such a model. These components include an anatomy ontology (Ao), an anatomical structural abstraction (...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Proceedings. AMIA Symposium
دوره شماره
صفحات -
تاریخ انتشار 1999